Prototype KG‑aware adaptation of the BioPortal interface. Graph pages generated from live KG‑Registry metadata; tool links go to the live BioPortal.
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SKM

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Stress Knowledge Map

agricultureorganismssystems biologypathwaysCC-BY-NC-SA-3.0sbgnmlsbmldotsif
Visibility: Public

A comprehensive knowledge graph resource for systems biology analysis of plant stress responses, containing mechanistic models and knowledge networks for plant stress signaling. It includes two knowledge graphs, the mechanistic Plant Stress Signalling model (PSS) and the Comprehensive Knowledge Network (CKN).

Graph at a glance

26,234
Nodes
500,000
Edges
Node categories
Predicate types

Products & downloads

sbgnml
PSS Live Download (SBGN-ML)
sbgn
3.1 MB
sbml
PSS Live Download (SBML)
sbml
535.7 KB
dot
PSS Download (DOT, v1.0.0)
graphviz
396.5 KB
sif
PSS Live Download, original (SIF/LGL)
sif-edges
157.9 KB
sif
PSS Live Download, original (SIF/LGL), node annotations
sif-nodes
392.5 KB
sif
PSS Live Download, projection (SIF/LGL)
rxn-edges
247.7 KB
sif
PSS Live Download, projection (SIF/LGL), node annotations
rxn-nodes
159.8 KB
sif
PSS Live Download, DiNAR (SIF/LGL)
dinar-edges
353.3 KB
boolnet
PSS Live Downloads (BoolNet)
boolnet
52.0 KB
boolnet
PSS Live Downloads (BoolNet), node annotations
boolnet-annot
69.3 KB
sif
CKN v2 (June 2023)
edges
2.6 MB
sif
CKN v2 (June 2023), node annotations
nodes
865.0 KB
sif
CKN v1 (June 2018)
edges
311.2 KB
sif
CKN v1 (June 2018), node annotations
nodes
685.9 KB

No node-type (Biolink category) breakdown is recorded for this graph. Total nodes: 26,234.

No edge-type (predicate) breakdown is recorded for this graph. Total edges: 500,000.