Prototype KG‑aware adaptation of the BioPortal interface. Graph pages generated from live KG‑Registry metadata; tool links go to the live BioPortal.
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SHEDDING-HUB

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Pathogen and Biomarker Shedding

KGXBioPortal ontologyv0.2.0spdx.org/licenses/MIT.html
Visibility: Public

A KGX transformation of the BioPortal ontology Pathogen and Biomarker Shedding (SHEDDING-HUB), produced by KG‑Bioportal. Nodes are ontology classes; edges are the relations between them. The base graph is the ontology on its own, imports stripped; the full graph, where built, has the import closure merged in.

Base graph at a glance

143
Nodes
358
Edges
0.2.0
Version
2026-10-01
Transformed

Products & downloads

Base
KGX base graph (imports stripped)
SHEDDING-HUB.tar.gz
143 nodes · 358 edges
Full
KGX full graph (imports merged in)
SHEDDING-HUB_full.tar.gz
167 nodes · 83 edges

The base graph contains SHEDDING-HUB_nodes.tsv and SHEDDING-HUB_edges.tsv. The full graph contains SHEDDING-HUB_full_nodes.tsv and SHEDDING-HUB_full_edges.tsv: this ontology plus the 1 it imports (and their imports in turn), merged by ROBOT. Use it when the imported terms matter; the base graph merges more cleanly with other graphs. Releases are incremental, so each link points at whichever release most recently rebuilt this ontology.

Imports 1

What this ontology pulls in through owl:imports. An import that is itself a BioPortal ontology links to its page here; a module of one links to the ontology it belongs to; anything else links out, or is named by its namespace when it is not a web address. The base graph leaves all of these out; the full graph, where built, has them merged in.

Biolink categories 1 category across 143 nodes

NamedThing143

An item carrying more than one category is counted under each, so these counts can add up to more than the total.

Biolink categories 1 category across 358 edges

Association358

An item carrying more than one category is counted under each, so these counts can add up to more than the total.