Prototype KG‑aware adaptation of the BioPortal interface. Graph pages generated from live KG‑Registry metadata; tool links go to the live BioPortal.
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REXO

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Regulation of Gene Expression Ontolology

KGXBioPortal ontologyv2015
Visibility: Public

A KGX transformation of the BioPortal ontology Regulation of Gene Expression Ontolology (REXO), produced by KG‑Bioportal. Nodes are ontology classes; edges are the relations between them.

Graph at a glance

158,276
Nodes
167,077
Edges
2015
Version
2026-09-14
Transformed

Products & downloads

KGX
KGX nodes & edges
REXO.tar.gz
158K nodes · 167K edges
Base graph is the full graph

This ontology declares no imports, so its base graph already is its full graph; nothing separate was built.

The graph contains REXO_nodes.tsv and REXO_edges.tsv. Releases are incremental, so each link points at whichever release most recently rebuilt this ontology.

Biolink categories 6 categories across 158,276 nodes

NamedThing85,232
Activity54,775
BiologicalProcessOrActivity10,646
Attribute3,939
CellularComponent2,394
MacromolecularComplex1,666

An item carrying more than one category is counted under each, so these counts can add up to more than the total.

How they were assigned 73,044 of 158,276 nodes (46.1%)

4is a seed term whose Biolink class is not in doubt
14,326inherits from a seed term above it in the hierarchy
58,714inherits from a root class placed by review

58,714 of these nodes inherit a category from 3 root classes reviewed by Claude (model version not recorded), in a Claude Code session with the maintainer; shipped in on 2026-08-26. Not yet confirmed by a maintainer. These root classes were placed by reading them and their subclasses in the published graph, with the assistance of an AI agent. The reading, the evidence, and the refusals are recorded in reviewed_roots.yaml. See how categories are assigned.

Biolink categories 1 category across 167,077 edges

Association167,077

An item carrying more than one category is counted under each, so these counts can add up to more than the total.