Prototype KG‑aware adaptation of the BioPortal interface. Graph pages generated from live KG‑Registry metadata; tool links go to the live BioPortal.
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PATO

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Phenotypic Quality Ontology

KGXBioPortal ontologyv2025-05-14CC BY 3.0
Visibility: Public

A KGX transformation of the BioPortal ontology Phenotypic Quality Ontology (PATO), produced by KG‑Bioportal. Nodes are ontology classes; edges are the relations between them.

Graph at a glance

9,032
Nodes
31,236
Edges
2025-05-14
Version
2026-09-14
Transformed

Products & downloads

KGX
KGX nodes & edges
PATO.tar.gz
9K nodes · 31K edges
Base graph is the full graph

This ontology declares no imports, so its base graph already is its full graph; nothing separate was built.

The graph contains PATO_nodes.tsv and PATO_edges.tsv. Releases are incremental, so each link points at whichever release most recently rebuilt this ontology.

Biolink categories 16 categories across 9,032 nodes

BiologicalProcessOrActivity2,996
Attribute1,890
AnatomicalEntity1,655
NamedThing1,500
Cell431
MolecularEntity198
CellularComponent174
ChemicalEntity55
Protein52
OrganismTaxon44
MacromolecularComplex14
LifeStage11
PhysicalEntity8
Polypeptide2
Activity1
Gene1

An item carrying more than one category is counted under each, so these counts can add up to more than the total.

How they were assigned 7,532 of 9,032 nodes (83.4%)

17is a seed term whose Biolink class is not in doubt
7,515inherits from a seed term above it in the hierarchy

Biolink categories 1 category across 31,236 edges

Association31,236

An item carrying more than one category is counted under each, so these counts can add up to more than the total.