Prototype KG‑aware adaptation of the BioPortal interface. Graph pages generated from live KG‑Registry metadata; tool links go to the live BioPortal.
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ONTOPBM

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Ontology for Process-Based Modeling of Dynamical Systems (OntoPBM)

KGXBioPortal ontologyv0.1CC BY 4.0
Visibility: Public

A KGX transformation of the BioPortal ontology Ontology for Process-Based Modeling of Dynamical Systems (OntoPBM) (ONTOPBM), produced by KG‑Bioportal. Nodes are ontology classes; edges are the relations between them.

Graph at a glance

274
Nodes
342
Edges
0.1
Version
2026-09-14
Transformed

Products & downloads

KGX
KGX nodes & edges
ONTOPBM.tar.gz
274 nodes · 342 edges
Base graph is the full graph

This ontology declares no imports, so its base graph already is its full graph; nothing separate was built.

The graph contains ONTOPBM_nodes.tsv and ONTOPBM_edges.tsv. Releases are incremental, so each link points at whichever release most recently rebuilt this ontology.

Biolink categories 5 categories across 274 nodes

NamedThing147
InformationContentEntity74
Attribute35
Activity15
PhysicalEntity3

An item carrying more than one category is counted under each, so these counts can add up to more than the total.

How they were assigned 127 of 274 nodes (46.4%)

4is a seed term whose Biolink class is not in doubt
123inherits from a seed term above it in the hierarchy

Biolink categories 1 category across 342 edges

Association342

An item carrying more than one category is counted under each, so these counts can add up to more than the total.