Prototype KG‑aware adaptation of the BioPortal interface. Graph pages generated from live KG‑Registry metadata; tool links go to the live BioPortal.
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OBIB

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Ontology for Biobanking

KGXBioPortal ontologyv2023-04-05CC BY 4.0
Visibility: Public

A KGX transformation of the BioPortal ontology Ontology for Biobanking (OBIB), produced by KG‑Bioportal. Nodes are ontology classes; edges are the relations between them.

Graph at a glance

2,419
Nodes
4,499
Edges
2023-04-05
Version
2026-09-14
Transformed

Products & downloads

KGX
KGX nodes & edges
OBIB.tar.gz
2K nodes · 4K edges
Base graph is the full graph

This ontology declares no imports, so its base graph already is its full graph; nothing separate was built.

The graph contains OBIB_nodes.tsv and OBIB_edges.tsv. Releases are incremental, so each link points at whichever release most recently rebuilt this ontology.

Biolink categories 14 categories across 2,419 nodes

NamedThing903
InformationContentEntity746
PhysicalEntity312
Procedure195
MaterialSample125
MolecularEntity37
Publication35
Attribute34
Cell12
Activity9
BiologicalProcessOrActivity5
CellLine2
MacromolecularComplex2
Protein2

An item carrying more than one category is counted under each, so these counts can add up to more than the total.

How they were assigned 1,516 of 2,419 nodes (62.7%)

13is a seed term whose Biolink class is not in doubt
1,503inherits from a seed term above it in the hierarchy

Biolink categories 1 category across 4,499 edges

Association4,499

An item carrying more than one category is counted under each, so these counts can add up to more than the total.