Prototype KG‑aware adaptation of the BioPortal interface. Graph pages generated from live KG‑Registry metadata; tool links go to the live BioPortal.
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HUPSON

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Human Physiology Simulation Ontology

KGXBioPortal ontologyv1.1.1
Visibility: Public

A KGX transformation of the BioPortal ontology Human Physiology Simulation Ontology (HUPSON), produced by KG‑Bioportal. Nodes are ontology classes; edges are the relations between them.

Graph at a glance

3,173
Nodes
3,901
Edges
1.1.1
Version
2026-09-14
Transformed

Products & downloads

KGX
KGX nodes & edges
HUPSON.tar.gz
3K nodes · 4K edges
Base graph is the full graph

This ontology declares no imports, so its base graph already is its full graph; nothing separate was built.

The graph contains HUPSON_nodes.tsv and HUPSON_edges.tsv. Releases are incremental, so each link points at whichever release most recently rebuilt this ontology.

Biolink categories 9 categories across 3,173 nodes

Attribute1,492
InformationContentEntity823
NamedThing489
PhysicalEntity232
BiologicalProcessOrActivity50
Procedure40
Activity34
Cell11
Publication2

An item carrying more than one category is counted under each, so these counts can add up to more than the total.

How they were assigned 2,684 of 3,173 nodes (84.6%)

21is a seed term whose Biolink class is not in doubt
2,663inherits from a seed term above it in the hierarchy

Biolink categories 1 category across 3,901 edges

Association3,901

An item carrying more than one category is counted under each, so these counts can add up to more than the total.