Prototype KG‑aware adaptation of the BioPortal interface. Graph pages generated from live KG‑Registry metadata; tool links go to the live BioPortal.
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HRA

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Human Reference Atlas

KGXBioPortal ontologyvv2.3CC BY 4.0
Visibility: Public

A KGX transformation of the BioPortal ontology Human Reference Atlas (HRA), produced by KG‑Bioportal. Nodes are ontology classes; edges are the relations between them.

Graph at a glance

190,296
Nodes
422,256
Edges
v2.3
Version
2026-09-14
Transformed

Products & downloads

KGX
KGX nodes & edges
HRA.tar.gz
190K nodes · 422K edges
Base graph is the full graph

This ontology declares no imports, so its base graph already is its full graph; nothing separate was built.

The graph contains HRA_nodes.tsv and HRA_edges.tsv. Releases are incremental, so each link points at whichever release most recently rebuilt this ontology.

Biolink categories 5 categories across 190,296 nodes

NamedThing178,833
AnatomicalEntity7,817
Cell1,832
Gene1,813
Attribute1

An item carrying more than one category is counted under each, so these counts can add up to more than the total.

How they were assigned 11,463 of 190,296 nodes (6.0%)

3is a seed term whose Biolink class is not in doubt
5,133inherits from a seed term above it in the hierarchy
6,327inherits from a root class placed by review

6,327 of these nodes inherit a category from 3 root classes reviewed by Claude (model version not recorded), in a Claude Code session with the maintainer; shipped in on 2026-08-26. Not yet confirmed by a maintainer. These root classes were placed by reading them and their subclasses in the published graph, with the assistance of an AI agent. The reading, the evidence, and the refusals are recorded in reviewed_roots.yaml. See how categories are assigned.

Biolink categories 1 category across 422,256 edges

Association422,256

An item carrying more than one category is counted under each, so these counts can add up to more than the total.