Prototype KG‑aware adaptation of the BioPortal interface. Graph pages generated from live KG‑Registry metadata; tool links go to the live BioPortal.
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EDAM

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EDAM - The ontology of data analysis and management

KGXBioPortal ontologyv1.25-20260626T1230ZCC BY-SA 4.0
Visibility: Public

A KGX transformation of the BioPortal ontology EDAM - The ontology of data analysis and management (EDAM), produced by KG‑Bioportal. Nodes are ontology classes; edges are the relations between them.

Graph at a glance

4,613
Nodes
15,463
Edges
1.25-20260626T1230Z
Version
2026-09-14
Transformed

Products & downloads

KGX
KGX nodes & edges
EDAM.tar.gz
5K nodes · 15K edges
Base graph is the full graph

This ontology declares no imports, so its base graph already is its full graph; nothing separate was built.

The graph contains EDAM_nodes.tsv and EDAM_edges.tsv. Releases are incremental, so each link points at whichever release most recently rebuilt this ontology.

Biolink categories 4 categories across 4,613 nodes

NamedThing4,610
Activity1
Attribute1
InformationContentEntity1

An item carrying more than one category is counted under each, so these counts can add up to more than the total.

How they were assigned 3 of 4,613 nodes (0.1%)

3is a seed term whose Biolink class is not in doubt

Biolink categories 1 category across 15,463 edges

Association15,463

An item carrying more than one category is counted under each, so these counts can add up to more than the total.