Prototype KG‑aware adaptation of the BioPortal interface. Graph pages generated from live KG‑Registry metadata; tool links go to the live BioPortal.
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CRISP

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Computer Retrieval of Information on Scientific Projects Thesaurus

KGXBioPortal ontologyvCSP2006
Visibility: Public

A KGX transformation of the BioPortal ontology Computer Retrieval of Information on Scientific Projects Thesaurus (CRISP), produced by KG‑Bioportal. Nodes are ontology classes; edges are the relations between them. The base graph is the ontology on its own, imports stripped; the full graph, where built, has the import closure merged in.

Base graph at a glance

9,053
Nodes
22,966
Edges
CSP2006
Version
2026-09-14
Transformed

Products & downloads

Base
KGX base graph (imports stripped)
CRISP.tar.gz
9K nodes · 23K edges
Full
KGX full graph (imports merged in)
CRISP_full.tar.gz
9K nodes · 23K edges

The base graph contains CRISP_nodes.tsv and CRISP_edges.tsv. The full graph contains CRISP_full_nodes.tsv and CRISP_full_edges.tsv: this ontology plus the 1 it imports (and their imports in turn), merged by ROBOT. Use it when the imported terms matter; the base graph merges more cleanly with other graphs. Releases are incremental, so each link points at whichever release most recently rebuilt this ontology.

Imports 1

What this ontology pulls in through owl:imports. An import that is itself a BioPortal ontology links to its page here; a module of one links to the ontology it belongs to; anything else links out, or is named by its namespace when it is not a web address. The base graph leaves all of these out; the full graph, where built, has them merged in.

Biolink categories 5 categories across 9,053 nodes

NamedThing3,384
ChemicalEntity2,790
Disease1,601
AnatomicalEntity730
OrganismTaxon550

An item carrying more than one category is counted under each, so these counts can add up to more than the total.

How they were assigned 5,669 of 9,053 nodes (62.6%)

5,669inherits from a root class placed by review

5,669 of these nodes inherit a category from 4 root classes reviewed by Claude Fable 5.1 (claude-fable-5-1), in a Claude Code session with the maintainer on 2026-09-10. Not yet confirmed by a maintainer. These root classes were placed by reading them and their subclasses in the published graph, with the assistance of an AI agent. The reading, the evidence, and the refusals are recorded in reviewed_roots.yaml. See how categories are assigned.

Biolink categories 1 category across 22,966 edges

Association22,966

An item carrying more than one category is counted under each, so these counts can add up to more than the total.