Prototype KG‑aware adaptation of the BioPortal interface. Graph pages generated from live KG‑Registry metadata; tool links go to the live BioPortal.
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CCF

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Human Reference Atlas Common Coordinate Framework Ontology

KGXBioPortal ontologyv3.0.0CC BY 4.0
Visibility: Public

A KGX transformation of the BioPortal ontology Human Reference Atlas Common Coordinate Framework Ontology (CCF), produced by KG‑Bioportal. Nodes are ontology classes; edges are the relations between them.

Graph at a glance

140
Nodes
23
Edges
3.0.0
Version
2026-09-14
Transformed

Products & downloads

KGX
KGX nodes & edges
CCF.tar.gz
140 nodes · 23 edges
Base graph is the full graph

This ontology declares no imports, so its base graph already is its full graph; nothing separate was built.

The graph contains CCF_nodes.tsv and CCF_edges.tsv. Releases are incremental, so each link points at whichever release most recently rebuilt this ontology.

Biolink categories 3 categories across 140 nodes

NamedThing134
AnatomicalEntity3
Cell3

An item carrying more than one category is counted under each, so these counts can add up to more than the total.

How they were assigned 6 of 140 nodes (4.3%)

2is a seed term whose Biolink class is not in doubt
4inherits from a root class placed by review

4 of these nodes inherit a category from 3 root classes reviewed by Claude (model version not recorded), in a Claude Code session with the maintainer; shipped in on 2026-08-26. Not yet confirmed by a maintainer. These root classes were placed by reading them and their subclasses in the published graph, with the assistance of an AI agent. The reading, the evidence, and the refusals are recorded in reviewed_roots.yaml. See how categories are assigned.

Biolink categories 1 category across 23 edges

Association23

An item carrying more than one category is counted under each, so these counts can add up to more than the total.